Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gtf2ird2Q99NI3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gtf2ird2Q99NI3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gtf2ird2Q99NI3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Gtf2ird2Q99NI3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gtf2ird2Q99NI3 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2ird2Q99NI3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2ird2Q99NI3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2ird2Q99NI3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2ird2Q99NI3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms