Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac9Q99N13 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.38■□□□□ 0.69
Hdac9Q99N13 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac9Q99N13 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac9Q99N13 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.38■□□□□ 0.69
Hdac9Q99N13 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.38■□□□□ 0.69
Hdac9Q99N13 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.38■□□□□ 0.69
Hdac9Q99N13 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.38■□□□□ 0.69
Hdac9Q99N13 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac9Q99N13 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac9Q99N13 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac9Q99N13 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.38■□□□□ 0.69
Hdac9Q99N13 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 Gm15173-201ENSMUST00000122049 433 ntBASIC19.37■□□□□ 0.69
Hdac9Q99N13 Gm5264-201ENSMUST00000190584 848 ntBASIC19.37■□□□□ 0.69
Hdac9Q99N13 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.37■□□□□ 0.69
Hdac9Q99N13 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Hdac9Q99N13 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.37■□□□□ 0.69
Hdac9Q99N13 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.37■□□□□ 0.69
Hdac9Q99N13 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac9Q99N13 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.36■□□□□ 0.69
Hdac9Q99N13 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac9Q99N13 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac9Q99N13 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.36■□□□□ 0.69
Hdac9Q99N13 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac9Q99N13 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac9Q99N13 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.35■□□□□ 0.69
Hdac9Q99N13 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hdac9Q99N13 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac9Q99N13 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac9Q99N13 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.35■□□□□ 0.69
Hdac9Q99N13 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hdac9Q99N13 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac9Q99N13 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.35■□□□□ 0.69
Hdac9Q99N13 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.35■□□□□ 0.69
Hdac9Q99N13 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac9Q99N13 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Hdac9Q99N13 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac9Q99N13 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.35■□□□□ 0.69
Hdac9Q99N13 Psmb5-202ENSMUST00000227257 622 ntBASIC19.35■□□□□ 0.69
Hdac9Q99N13 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac9Q99N13 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac9Q99N13 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Gm11779-201ENSMUST00000118541 368 ntBASIC19.34■□□□□ 0.69
Hdac9Q99N13 Gm15467-201ENSMUST00000120582 445 ntBASIC19.34■□□□□ 0.69
Hdac9Q99N13 Gm12497-201ENSMUST00000138778 237 ntBASIC19.34■□□□□ 0.69
Hdac9Q99N13 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.34■□□□□ 0.69
Hdac9Q99N13 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.34■□□□□ 0.69
Hdac9Q99N13 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac9Q99N13 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.33■□□□□ 0.69
Hdac9Q99N13 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac9Q99N13 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Hdac9Q99N13 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.33■□□□□ 0.69
Hdac9Q99N13 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac9Q99N13 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Hdac9Q99N13 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Hdac9Q99N13 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms