Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf111Q99ML9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf111Q99ML9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf111Q99ML9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf111Q99ML9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf111Q99ML9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf111Q99ML9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Gm37055-201ENSMUST00000191866 133 ntBASIC16.02■□□□□ 0.16
Rnf111Q99ML9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf111Q99ML9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf111Q99ML9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf111Q99ML9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf111Q99ML9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf111Q99ML9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Rnf111Q99ML9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf111Q99ML9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf111Q99ML9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf111Q99ML9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Rnf111Q99ML9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rnf111Q99ML9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rnf111Q99ML9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Gm9484-201ENSMUST00000195892 1159 ntBASIC16■□□□□ 0.15
Rnf111Q99ML9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16■□□□□ 0.15
Rnf111Q99ML9 AC135963.1-201ENSMUST00000211640 717 ntBASIC16■□□□□ 0.15
Rnf111Q99ML9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rnf111Q99ML9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf111Q99ML9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Mir7071-201ENSMUST00000184847 69 ntBASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Gm7791-201ENSMUST00000219066 539 ntBASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms