Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdca3Q99M54 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdca3Q99M54 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdca3Q99M54 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdca3Q99M54 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdca3Q99M54 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdca3Q99M54 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.31■□□□□ 0.04
Cdca3Q99M54 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.31■□□□□ 0.04
Cdca3Q99M54 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdca3Q99M54 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cdca3Q99M54 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Gm17808-201ENSMUST00000200859 894 ntBASIC15.3■□□□□ 0.04
Cdca3Q99M54 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.3■□□□□ 0.04
Cdca3Q99M54 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdca3Q99M54 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdca3Q99M54 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Gm7638-201ENSMUST00000121348 967 ntBASIC15.29■□□□□ 0.04
Cdca3Q99M54 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Gm7791-201ENSMUST00000219066 539 ntBASIC15.29■□□□□ 0.04
Cdca3Q99M54 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cdca3Q99M54 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdca3Q99M54 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.28■□□□□ 0.04
Cdca3Q99M54 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms