Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Odf3b-204ENSMUST00000227834 930 ntBASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap3Q99LM2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap3Q99LM2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap3Q99LM2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk5rap3Q99LM2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk5rap3Q99LM2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk5rap3Q99LM2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk5rap3Q99LM2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk5rap3Q99LM2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk5rap3Q99LM2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk5rap3Q99LM2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Gm715-201ENSMUST00000117865 831 ntBASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Gm3375-201ENSMUST00000203929 796 ntBASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms