Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Gm27628-201ENSMUST00000184911 107 ntBASIC17.39■□□□□ 0.37
Clp1Q99LI9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clp1Q99LI9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clp1Q99LI9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clp1Q99LI9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Clp1Q99LI9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clp1Q99LI9 Gm4995-201ENSMUST00000117247 432 ntBASIC17.38■□□□□ 0.37
Clp1Q99LI9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clp1Q99LI9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.38■□□□□ 0.37
Clp1Q99LI9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clp1Q99LI9 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.38■□□□□ 0.37
Clp1Q99LI9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clp1Q99LI9 Gm8655-201ENSMUST00000221159 852 ntBASIC17.38■□□□□ 0.37
Clp1Q99LI9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.38■□□□□ 0.37
Clp1Q99LI9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clp1Q99LI9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clp1Q99LI9 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.38■□□□□ 0.37
Clp1Q99LI9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clp1Q99LI9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.38■□□□□ 0.37
Clp1Q99LI9 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.38■□□□□ 0.37
Clp1Q99LI9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Gm9172-201ENSMUST00000212092 954 ntBASIC17.37■□□□□ 0.37
Clp1Q99LI9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.37■□□□□ 0.37
Clp1Q99LI9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clp1Q99LI9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Gm24513-201ENSMUST00000174964 138 ntBASIC17.36■□□□□ 0.37
Clp1Q99LI9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.36■□□□□ 0.37
Clp1Q99LI9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clp1Q99LI9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.35■□□□□ 0.37
Clp1Q99LI9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Gm7222-201ENSMUST00000117512 906 ntBASIC17.35■□□□□ 0.37
Clp1Q99LI9 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.35■□□□□ 0.37
Clp1Q99LI9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Gm27397-201ENSMUST00000184997 107 ntBASIC17.35■□□□□ 0.37
Clp1Q99LI9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.35■□□□□ 0.37
Clp1Q99LI9 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.35■□□□□ 0.37
Clp1Q99LI9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clp1Q99LI9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clp1Q99LI9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Clp1Q99LI9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms