Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TrabdQ99JY4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
TrabdQ99JY4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TrabdQ99JY4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TrabdQ99JY4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TrabdQ99JY4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Gm15372-201ENSMUST00000120729 834 ntBASIC17.14■□□□□ 0.33
TrabdQ99JY4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TrabdQ99JY4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.14■□□□□ 0.33
TrabdQ99JY4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TrabdQ99JY4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TrabdQ99JY4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.13■□□□□ 0.33
TrabdQ99JY4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TrabdQ99JY4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TrabdQ99JY4 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.12■□□□□ 0.33
TrabdQ99JY4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TrabdQ99JY4 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.12■□□□□ 0.33
TrabdQ99JY4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TrabdQ99JY4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TrabdQ99JY4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TrabdQ99JY4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TrabdQ99JY4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TrabdQ99JY4 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.12■□□□□ 0.33
TrabdQ99JY4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TrabdQ99JY4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.12■□□□□ 0.33
TrabdQ99JY4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TrabdQ99JY4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TrabdQ99JY4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TrabdQ99JY4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TrabdQ99JY4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Gm24589-201ENSMUST00000116692 94 ntBASIC17.11■□□□□ 0.33
TrabdQ99JY4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.11■□□□□ 0.33
TrabdQ99JY4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TrabdQ99JY4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms