Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Gm7230-201ENSMUST00000173026 815 ntBASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd2Q99JR8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd2Q99JR8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Gm25925-201ENSMUST00000158314 306 ntBASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd2Q99JR8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd2Q99JR8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Gm15173-201ENSMUST00000122049 433 ntBASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Gm12497-201ENSMUST00000138778 237 ntBASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms