Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk9Q99J95 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Gm12527-201ENSMUST00000117967 564 ntBASIC16.66■□□□□ 0.26
Cdk9Q99J95 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk9Q99J95 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Gm20049-201ENSMUST00000219950 730 ntBASIC16.65■□□□□ 0.26
Cdk9Q99J95 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk9Q99J95 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.64■□□□□ 0.26
Cdk9Q99J95 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cdk9Q99J95 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cdk9Q99J95 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Gm15375-201ENSMUST00000119510 849 ntBASIC16.64■□□□□ 0.25
Cdk9Q99J95 Gm10653-202ENSMUST00000139570 835 ntBASIC16.64■□□□□ 0.25
Cdk9Q99J95 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.64■□□□□ 0.25
Cdk9Q99J95 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk9Q99J95 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms