Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha3Q91Y16 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha3Q91Y16 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Gm10566-201ENSMUST00000086739 996 ntBASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha3Q91Y16 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Gm5587-201ENSMUST00000206270 674 ntBASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms