Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Gm27389-201ENSMUST00000183622 195 ntBASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb1Q91Y08 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.34
Pcdhb1Q91Y08 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Gm21559-201ENSMUST00000220638 855 ntBASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Gm8587-201ENSMUST00000076538 843 ntBASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb1Q91Y08 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Gm22697-201ENSMUST00000175194 63 ntBASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhb1Q91Y08 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms