Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb20Q91XZ9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb20Q91XZ9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb20Q91XZ9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Gm37293-201ENSMUST00000191658 295 ntBASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Gm37641-201ENSMUST00000193837 239 ntBASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Pcdhb20Q91XZ9 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Gm18421-201ENSMUST00000204122 625 ntBASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb20Q91XZ9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Gm22119-201ENSMUST00000175594 99 ntBASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Gm29107-201ENSMUST00000190910 347 ntBASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Gm45071-201ENSMUST00000205353 571 ntBASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb20Q91XZ9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms