Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Gm18958-201ENSMUST00000174258 762 ntBASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Mir5122-201ENSMUST00000175004 89 ntBASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.38■□□□□ 0.21
Pcdhb4Q91XZ6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb4Q91XZ6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms