Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Gm9013-201ENSMUST00000132939 882 ntBASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdhga4Q91XY4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga4Q91XY4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga4Q91XY4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Gm11355-201ENSMUST00000121120 306 ntBASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Gm26039-201ENSMUST00000158152 144 ntBASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms