Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Gm13148-201ENSMUST00000118892 745 ntBASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgc3Q91XX1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Gm26524-201ENSMUST00000192339 390 ntBASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgc3Q91XX1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Gm11927-201ENSMUST00000118472 759 ntBASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgc3Q91XX1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Mtag2-201ENSMUST00000058665 714 ntBASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Asic1-205ENSMUST00000228185 1818 ntBASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms