Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.81■□□□□ 0.28
Lims2Q91XD2 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.81■□□□□ 0.28
Lims2Q91XD2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Gm34391-201ENSMUST00000203706 907 ntBASIC16.81■□□□□ 0.28
Lims2Q91XD2 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.81■□□□□ 0.28
Lims2Q91XD2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.81■□□□□ 0.28
Lims2Q91XD2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lims2Q91XD2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.8■□□□□ 0.28
Lims2Q91XD2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Mir6404-201ENSMUST00000183699 94 ntBASIC16.8■□□□□ 0.28
Lims2Q91XD2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Birc2-201ENSMUST00000054878 378 ntBASIC16.8■□□□□ 0.28
Lims2Q91XD2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lims2Q91XD2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.79■□□□□ 0.28
Lims2Q91XD2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lims2Q91XD2 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.78■□□□□ 0.28
Lims2Q91XD2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.78■□□□□ 0.28
Lims2Q91XD2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lims2Q91XD2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lims2Q91XD2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lims2Q91XD2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lims2Q91XD2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Lims2Q91XD2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lims2Q91XD2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lims2Q91XD2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lims2Q91XD2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lims2Q91XD2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lims2Q91XD2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lims2Q91XD2 Gm15165-201ENSMUST00000118140 502 ntBASIC16.77■□□□□ 0.28
Lims2Q91XD2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.77■□□□□ 0.28
Lims2Q91XD2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lims2Q91XD2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lims2Q91XD2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lims2Q91XD2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Lims2Q91XD2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lims2Q91XD2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Lims2Q91XD2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lims2Q91XD2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lims2Q91XD2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lims2Q91XD2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms