Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Gm29013-201ENSMUST00000187431 237 ntBASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb17Q91VD8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Gm29518-201ENSMUST00000190858 372 ntBASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Gm17917-201ENSMUST00000218561 953 ntBASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb17Q91VD8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Gm18719-201ENSMUST00000196696 1413 ntBASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb17Q91VD8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Gm11950-201ENSMUST00000121615 838 ntBASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Gm17808-201ENSMUST00000200859 894 ntBASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Gm14667-201ENSMUST00000119448 1350 ntBASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms