Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm9682-201ENSMUST00000197505 556 ntBASIC19.63■□□□□ 0.73
StrcQ8VIM6 Gm18622-201ENSMUST00000219361 595 ntBASIC19.63■□□□□ 0.73
StrcQ8VIM6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
StrcQ8VIM6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
StrcQ8VIM6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.62■□□□□ 0.73
StrcQ8VIM6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.62■□□□□ 0.73
StrcQ8VIM6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.62■□□□□ 0.73
StrcQ8VIM6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
StrcQ8VIM6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.61■□□□□ 0.73
StrcQ8VIM6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.61■□□□□ 0.73
StrcQ8VIM6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Gm20949-201ENSMUST00000206478 952 ntBASIC19.61■□□□□ 0.73
StrcQ8VIM6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
StrcQ8VIM6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
StrcQ8VIM6 Mir1895-201ENSMUST00000122615 79 ntBASIC19.6■□□□□ 0.73
StrcQ8VIM6 Gm45747-201ENSMUST00000212203 999 ntBASIC19.6■□□□□ 0.73
StrcQ8VIM6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.6■□□□□ 0.73
StrcQ8VIM6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.6■□□□□ 0.73
StrcQ8VIM6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
StrcQ8VIM6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
StrcQ8VIM6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
StrcQ8VIM6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
StrcQ8VIM6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
StrcQ8VIM6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
StrcQ8VIM6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
StrcQ8VIM6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
StrcQ8VIM6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.6■□□□□ 0.73
StrcQ8VIM6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.6■□□□□ 0.73
StrcQ8VIM6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
StrcQ8VIM6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
StrcQ8VIM6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Gm25948-201ENSMUST00000175334 112 ntBASIC19.59■□□□□ 0.73
StrcQ8VIM6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
StrcQ8VIM6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
StrcQ8VIM6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
StrcQ8VIM6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.58■□□□□ 0.73
StrcQ8VIM6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
StrcQ8VIM6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
StrcQ8VIM6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.58■□□□□ 0.73
StrcQ8VIM6 Gm8344-201ENSMUST00000119813 856 ntBASIC19.58■□□□□ 0.73
StrcQ8VIM6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
StrcQ8VIM6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
StrcQ8VIM6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.58■□□□□ 0.73
StrcQ8VIM6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
StrcQ8VIM6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.58■□□□□ 0.73
StrcQ8VIM6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms