Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim60Q8VI40 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim60Q8VI40 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim60Q8VI40 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trim60Q8VI40 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.08■□□□□ 0.32
Trim60Q8VI40 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trim60Q8VI40 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim60Q8VI40 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.07■□□□□ 0.32
Trim60Q8VI40 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.07■□□□□ 0.32
Trim60Q8VI40 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim60Q8VI40 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.06■□□□□ 0.32
Trim60Q8VI40 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Gm13168-201ENSMUST00000121771 632 ntBASIC17.06■□□□□ 0.32
Trim60Q8VI40 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim60Q8VI40 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim60Q8VI40 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Trim60Q8VI40 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.05■□□□□ 0.32
Trim60Q8VI40 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Trim60Q8VI40 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Dancr-204ENSMUST00000132389 2347 ntBASIC17.04■□□□□ 0.32
Trim60Q8VI40 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms