Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Gm6089-201ENSMUST00000197666 938 ntBASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Gm11780-201ENSMUST00000136880 516 ntBASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Gm5264-201ENSMUST00000190584 848 ntBASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 AV026068-213ENSMUST00000223675 1171 ntBASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Gm15590-201ENSMUST00000078419 552 ntBASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71Q8VEG0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Gm6550-201ENSMUST00000187574 993 ntBASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Gm9172-201ENSMUST00000212092 954 ntBASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc71Q8VEG0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Gm15467-201ENSMUST00000120582 445 ntBASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Gm2213-201ENSMUST00000197485 688 ntBASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc71Q8VEG0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc71Q8VEG0 Gm25406-201ENSMUST00000157599 105 ntBASIC17.02■□□□□ 0.32
Ccdc71Q8VEG0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Ccdc71Q8VEG0 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.02■□□□□ 0.32
Ccdc71Q8VEG0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc71Q8VEG0 Gm8655-201ENSMUST00000221159 852 ntBASIC17.02■□□□□ 0.32
Ccdc71Q8VEG0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc71Q8VEG0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc71Q8VEG0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc71Q8VEG0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms