Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rprd1aQ8VDS4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rprd1aQ8VDS4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rprd1aQ8VDS4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rprd1aQ8VDS4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.98■□□□□ 0.31
Rprd1aQ8VDS4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rprd1aQ8VDS4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rprd1aQ8VDS4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Rprd1aQ8VDS4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rprd1aQ8VDS4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rprd1aQ8VDS4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rprd1aQ8VDS4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rprd1aQ8VDS4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rprd1aQ8VDS4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Gm14859-201ENSMUST00000117752 357 ntBASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Gm21362-201ENSMUST00000194272 928 ntBASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rprd1aQ8VDS4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Gm7284-201ENSMUST00000131667 944 ntBASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rprd1aQ8VDS4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Rprd1aQ8VDS4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rprd1aQ8VDS4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rprd1aQ8VDS4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rprd1aQ8VDS4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 163.2 ms