Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Gm18115-201ENSMUST00000221209 621 ntBASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Gm7889-201ENSMUST00000185591 958 ntBASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Gm43799-201ENSMUST00000201845 579 ntBASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20aQ8VDB9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20aQ8VDB9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20aQ8VDB9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20aQ8VDB9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.27■□□□□ 0.19
Slc6a20aQ8VDB9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Slc6a20aQ8VDB9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20aQ8VDB9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.27■□□□□ 0.19
Slc6a20aQ8VDB9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20aQ8VDB9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20aQ8VDB9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20aQ8VDB9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Slc6a20aQ8VDB9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Gm44450-201ENSMUST00000199528 114 ntBASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.26■□□□□ 0.19
Slc6a20aQ8VDB9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a20aQ8VDB9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a20aQ8VDB9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a20aQ8VDB9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a20aQ8VDB9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms