Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Gm17971-201ENSMUST00000190239 806 ntBASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ndc1Q8VCB1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ndc1Q8VCB1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ndc1Q8VCB1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Gm27357-201ENSMUST00000183754 135 ntBASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms