Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpap2Q8VC34 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rpap2Q8VC34 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpap2Q8VC34 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Rpap2Q8VC34 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Rpap2Q8VC34 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.11■□□□□ 0.49
Rpap2Q8VC34 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.11■□□□□ 0.49
Rpap2Q8VC34 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.11■□□□□ 0.49
Rpap2Q8VC34 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpap2Q8VC34 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpap2Q8VC34 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpap2Q8VC34 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rpap2Q8VC34 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpap2Q8VC34 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpap2Q8VC34 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpap2Q8VC34 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.08■□□□□ 0.49
Rpap2Q8VC34 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpap2Q8VC34 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpap2Q8VC34 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.08■□□□□ 0.49
Rpap2Q8VC34 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpap2Q8VC34 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpap2Q8VC34 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpap2Q8VC34 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rpap2Q8VC34 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpap2Q8VC34 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpap2Q8VC34 Mir770-201ENSMUST00000103252 94 ntBASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Gm25016-201ENSMUST00000158399 131 ntBASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Gm23634-201ENSMUST00000175071 91 ntBASIC18.08■□□□□ 0.48
Rpap2Q8VC34 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpap2Q8VC34 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Gm36967-201ENSMUST00000193814 266 ntBASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpap2Q8VC34 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms