Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.53■□□□□ 0.24
Vps39Q8R5L3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps39Q8R5L3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps39Q8R5L3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.52■□□□□ 0.23
Vps39Q8R5L3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps39Q8R5L3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
Vps39Q8R5L3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps39Q8R5L3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps39Q8R5L3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps39Q8R5L3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Vps39Q8R5L3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps39Q8R5L3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vps39Q8R5L3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Vps39Q8R5L3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vps39Q8R5L3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Gm5417-201ENSMUST00000079706 384 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms