Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Dio3-201ENSMUST00000097228 1449 ntBASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Gm12896-201ENSMUST00000118430 226 ntBASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Mtag2-201ENSMUST00000058665 714 ntBASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slf1Q8R3P9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Slf1Q8R3P9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Slf1Q8R3P9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Asic1-205ENSMUST00000228185 1818 ntBASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Mir2861-201ENSMUST00000175539 82 ntBASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slf1Q8R3P9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms