Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim29Q8R2Q0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim29Q8R2Q0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.83■□□□□ 0.61
Trim29Q8R2Q0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trim29Q8R2Q0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Trim29Q8R2Q0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim29Q8R2Q0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim29Q8R2Q0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Trim29Q8R2Q0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim29Q8R2Q0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim29Q8R2Q0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim29Q8R2Q0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim29Q8R2Q0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim29Q8R2Q0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Gm26039-201ENSMUST00000158152 144 ntBASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Gm27389-201ENSMUST00000183622 195 ntBASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Gm10566-201ENSMUST00000086739 996 ntBASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms