Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Gm37025-201ENSMUST00000195159 829 ntBASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nudcd3Q8R1N4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Gm8495-201ENSMUST00000188740 694 ntBASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nudcd3Q8R1N4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nudcd3Q8R1N4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nudcd3Q8R1N4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nudcd3Q8R1N4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nudcd3Q8R1N4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.52■□□□□ 0.23
Nudcd3Q8R1N4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nudcd3Q8R1N4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nudcd3Q8R1N4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nudcd3Q8R1N4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nudcd3Q8R1N4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nudcd3Q8R1N4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms