Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tm6sf2Q8R1J1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tm6sf2Q8R1J1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Gm27742-201ENSMUST00000184667 60 ntBASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.47■□□□□ 0.07
Tm6sf2Q8R1J1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tm6sf2Q8R1J1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tm6sf2Q8R1J1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 2264.1 ms