Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3a1Q8K4Z5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3a1Q8K4Z5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Gm13216-201ENSMUST00000117145 591 ntBASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Gm29518-201ENSMUST00000190858 372 ntBASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3a1Q8K4Z5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3a1Q8K4Z5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sf3a1Q8K4Z5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Sf3a1Q8K4Z5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Sf3a1Q8K4Z5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Sf3a1Q8K4Z5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.14■□□□□ 0.82
Sf3a1Q8K4Z5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms