Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Gm11927-201ENSMUST00000118472 759 ntBASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf4Q8K4J2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ebf4Q8K4J2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ebf4Q8K4J2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.08■□□□□ 0
Ebf4Q8K4J2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf4Q8K4J2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.07■□□□□ 0
Ebf4Q8K4J2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms