Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim68Q8K243 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim68Q8K243 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim68Q8K243 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim68Q8K243 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim68Q8K243 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trim68Q8K243 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.87■□□□□ 0.45
Trim68Q8K243 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim68Q8K243 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Trim68Q8K243 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim68Q8K243 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim68Q8K243 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim68Q8K243 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim68Q8K243 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim68Q8K243 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim68Q8K243 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Gm18206-201ENSMUST00000207027 926 ntBASIC17.86■□□□□ 0.45
Trim68Q8K243 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim68Q8K243 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trim68Q8K243 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim68Q8K243 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim68Q8K243 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim68Q8K243 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim68Q8K243 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim68Q8K243 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim68Q8K243 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim68Q8K243 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Trim68Q8K243 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim68Q8K243 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.85■□□□□ 0.45
Trim68Q8K243 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim68Q8K243 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim68Q8K243 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim68Q8K243 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim68Q8K243 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim68Q8K243 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim68Q8K243 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim68Q8K243 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim68Q8K243 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim68Q8K243 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim68Q8K243 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.84■□□□□ 0.45
Trim68Q8K243 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim68Q8K243 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim68Q8K243 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim68Q8K243 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim68Q8K243 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.84■□□□□ 0.45
Trim68Q8K243 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim68Q8K243 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim68Q8K243 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim68Q8K243 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim68Q8K243 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim68Q8K243 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim68Q8K243 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim68Q8K243 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim68Q8K243 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim68Q8K243 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim68Q8K243 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim68Q8K243 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim68Q8K243 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim68Q8K243 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Trim68Q8K243 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Trim68Q8K243 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim68Q8K243 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim68Q8K243 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim68Q8K243 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.83■□□□□ 0.44
Trim68Q8K243 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.83■□□□□ 0.44
Trim68Q8K243 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.83■□□□□ 0.44
Trim68Q8K243 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim68Q8K243 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms