Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h3Q8CHP0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h3Q8CHP0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Zc3h3Q8CHP0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Zc3h3Q8CHP0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Zc3h3Q8CHP0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Zc3h3Q8CHP0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Zc3h3Q8CHP0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Zc3h3Q8CHP0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Mir1895-201ENSMUST00000122615 79 ntBASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.08■□□□□ 0.16
Zc3h3Q8CHP0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Gm5682-201ENSMUST00000173402 505 ntBASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Gm27494-201ENSMUST00000184735 189 ntBASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Mir7023-201ENSMUST00000185093 64 ntBASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3h3Q8CHP0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3h3Q8CHP0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3h3Q8CHP0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3h3Q8CHP0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Zc3h3Q8CHP0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3h3Q8CHP0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3h3Q8CHP0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3h3Q8CHP0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3h3Q8CHP0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms