Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.06■□□□□ 0.16
Rab43Q8CG50 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.06■□□□□ 0.16
Rab43Q8CG50 AW822252-206ENSMUST00000208904 237 ntBASIC16.06■□□□□ 0.16
Rab43Q8CG50 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Rab43Q8CG50 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.06■□□□□ 0.16
Rab43Q8CG50 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.06■□□□□ 0.16
Rab43Q8CG50 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab43Q8CG50 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab43Q8CG50 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rab43Q8CG50 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.05■□□□□ 0.16
Rab43Q8CG50 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Rab43Q8CG50 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Gm2651-201ENSMUST00000203560 838 ntBASIC16.04■□□□□ 0.16
Rab43Q8CG50 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.04■□□□□ 0.16
Rab43Q8CG50 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab43Q8CG50 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.04■□□□□ 0.16
Rab43Q8CG50 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab43Q8CG50 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.04■□□□□ 0.16
Rab43Q8CG50 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.03■□□□□ 0.16
Rab43Q8CG50 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.03■□□□□ 0.16
Rab43Q8CG50 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.03■□□□□ 0.16
Rab43Q8CG50 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab43Q8CG50 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rab43Q8CG50 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rab43Q8CG50 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rab43Q8CG50 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms