Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Gm18206-201ENSMUST00000207027 926 ntBASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim52Q8CDV4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Gm8097-201ENSMUST00000117903 829 ntBASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Gm1401-201ENSMUST00000122048 772 ntBASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Mir5126-201ENSMUST00000175513 77 ntBASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Mir6404-201ENSMUST00000183699 94 ntBASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Gm9172-201ENSMUST00000212092 954 ntBASIC20.31■□□□□ 0.84
Trim52Q8CDV4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Trim52Q8CDV4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Gm7230-201ENSMUST00000173026 815 ntBASIC20.3■□□□□ 0.84
Trim52Q8CDV4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim52Q8CDV4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim52Q8CDV4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim52Q8CDV4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim52Q8CDV4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim52Q8CDV4 Gm11780-201ENSMUST00000136880 516 ntBASIC20.29■□□□□ 0.84
Trim52Q8CDV4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trim52Q8CDV4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.29■□□□□ 0.84
Trim52Q8CDV4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim52Q8CDV4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim52Q8CDV4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim52Q8CDV4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
Trim52Q8CDV4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim52Q8CDV4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim52Q8CDV4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim52Q8CDV4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim52Q8CDV4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim52Q8CDV4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.27■□□□□ 0.84
Trim52Q8CDV4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.27■□□□□ 0.84
Trim52Q8CDV4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim52Q8CDV4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim52Q8CDV4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim52Q8CDV4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim52Q8CDV4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim52Q8CDV4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.27■□□□□ 0.84
Trim52Q8CDV4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim52Q8CDV4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim52Q8CDV4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms