Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.35■□□□□ 0.37
Q8CD60 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.35■□□□□ 0.37
Q8CD60 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Q8CD60 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8CD60 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Q8CD60 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8CD60 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Q8CD60 Mir770-201ENSMUST00000103252 94 ntBASIC17.34■□□□□ 0.37
Q8CD60 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.34■□□□□ 0.37
Q8CD60 Gm6345-202ENSMUST00000180900 204 ntBASIC17.34■□□□□ 0.37
Q8CD60 Gm29707-201ENSMUST00000196325 491 ntBASIC17.34■□□□□ 0.37
Q8CD60 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Q8CD60 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.34■□□□□ 0.37
Q8CD60 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Q8CD60 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8CD60 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8CD60 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8CD60 Haglr-201ENSMUST00000100000 2085 ntBASIC17.33■□□□□ 0.37
Q8CD60 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Q8CD60 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8CD60 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Q8CD60 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8CD60 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8CD60 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8CD60 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8CD60 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8CD60 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.33■□□□□ 0.36
Q8CD60 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q8CD60 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.33■□□□□ 0.36
Q8CD60 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8CD60 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q8CD60 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8CD60 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8CD60 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Q8CD60 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8CD60 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q8CD60 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8CD60 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8CD60 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8CD60 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Q8CD60 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8CD60 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Q8CD60 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Q8CD60 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.32■□□□□ 0.36
Q8CD60 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Q8CD60 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 AA414768-201ENSMUST00000121924 1257 ntBASIC17.32■□□□□ 0.36
Q8CD60 Gm9013-201ENSMUST00000132939 882 ntBASIC17.32■□□□□ 0.36
Q8CD60 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.32■□□□□ 0.36
Q8CD60 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.32■□□□□ 0.36
Q8CD60 Gm5587-201ENSMUST00000206270 674 ntBASIC17.32■□□□□ 0.36
Q8CD60 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.32■□□□□ 0.36
Q8CD60 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.32■□□□□ 0.36
Q8CD60 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8CD60 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Q8CD60 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Q8CD60 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q8CD60 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.31■□□□□ 0.36
Q8CD60 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Q8CD60 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Q8CD60 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8CD60 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8CD60 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8CD60 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8CD60 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8CD60 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Q8CD60 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q8CD60 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8CD60 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Q8CD60 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Q8CD60 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8CD60 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms