Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Aph1bQ8C7N7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Aph1bQ8C7N7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Aph1bQ8C7N7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Aph1bQ8C7N7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Aph1bQ8C7N7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Aph1bQ8C7N7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Aph1bQ8C7N7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Aph1bQ8C7N7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Gm27011-201ENSMUST00000182352 972 ntBASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Aph1bQ8C7N7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Gm22240-201ENSMUST00000175225 82 ntBASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Gm18115-201ENSMUST00000221209 621 ntBASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Aph1bQ8C7N7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Gm10812-201ENSMUST00000099864 546 ntBASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Aph1bQ8C7N7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms