Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Sh3rf3Q8C120 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Mir1668-201ENSMUST00000184114 107 ntBASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.18■□□□□ 0.34
Sh3rf3Q8C120 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf3Q8C120 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sh3rf3Q8C120 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms