Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Gm21559-201ENSMUST00000220638 855 ntBASIC17.03■□□□□ 0.32
Trub1Q8C0D0 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Gm9987-201ENSMUST00000069768 567 ntBASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Gm8587-201ENSMUST00000076538 843 ntBASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trub1Q8C0D0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Gm22697-201ENSMUST00000175194 63 ntBASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Gm27389-201ENSMUST00000183622 195 ntBASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Gm18032-201ENSMUST00000222541 538 ntBASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trub1Q8C0D0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trub1Q8C0D0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trub1Q8C0D0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Trub1Q8C0D0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.02■□□□□ 0.31
Trub1Q8C0D0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trub1Q8C0D0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Trub1Q8C0D0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trub1Q8C0D0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17■□□□□ 0.31
Trub1Q8C0D0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17■□□□□ 0.31
Trub1Q8C0D0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17■□□□□ 0.31
Trub1Q8C0D0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Trub1Q8C0D0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trub1Q8C0D0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17■□□□□ 0.31
Trub1Q8C0D0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trub1Q8C0D0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms