Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Gm45525-201ENSMUST00000210800 389 ntBASIC17.18■□□□□ 0.34
Trim35Q8C006 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim35Q8C006 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim35Q8C006 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim35Q8C006 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim35Q8C006 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim35Q8C006 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim35Q8C006 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trim35Q8C006 Gm7714-201ENSMUST00000169154 685 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trim35Q8C006 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim35Q8C006 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim35Q8C006 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim35Q8C006 Gm21814-202ENSMUST00000203277 873 ntBASIC17.17■□□□□ 0.34
Trim35Q8C006 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.17■□□□□ 0.34
Trim35Q8C006 AC140368.1-202ENSMUST00000226131 658 ntBASIC17.17■□□□□ 0.34
Trim35Q8C006 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Trim35Q8C006 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.17■□□□□ 0.34
Trim35Q8C006 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim35Q8C006 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim35Q8C006 Gm38325-201ENSMUST00000194507 1377 ntBASIC17.16■□□□□ 0.34
Trim35Q8C006 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim35Q8C006 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim35Q8C006 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim35Q8C006 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim35Q8C006 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim35Q8C006 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim35Q8C006 Gm37517-201ENSMUST00000194004 1289 ntBASIC17.16■□□□□ 0.34
Trim35Q8C006 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim35Q8C006 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC17.16■□□□□ 0.34
Trim35Q8C006 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim35Q8C006 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim35Q8C006 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim35Q8C006 CT010447.1-201ENSMUST00000225657 1608 ntBASIC17.16■□□□□ 0.34
Trim35Q8C006 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim35Q8C006 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim35Q8C006 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim35Q8C006 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim35Q8C006 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim35Q8C006 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim35Q8C006 Gm20852-202ENSMUST00000188011 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.15■□□□□ 0.34
Trim35Q8C006 AC131743.3-201ENSMUST00000222099 662 ntBASIC17.15■□□□□ 0.34
Trim35Q8C006 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim35Q8C006 AC154843.1-201ENSMUST00000226897 1138 ntBASIC17.15■□□□□ 0.34
Trim35Q8C006 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim35Q8C006 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim35Q8C006 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim35Q8C006 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim35Q8C006 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim35Q8C006 Gm44286-201ENSMUST00000204098 1487 ntBASIC17.14■□□□□ 0.33
Trim35Q8C006 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC17.14■□□□□ 0.33
Trim35Q8C006 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim35Q8C006 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim35Q8C006 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim35Q8C006 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim35Q8C006 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms