Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Gm27867-201ENSMUST00000184778 125 ntBASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sh3rf2Q8BZT2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Gm44454-201ENSMUST00000198541 138 ntBASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf2Q8BZT2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Gm15165-201ENSMUST00000118140 502 ntBASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Gm11452-201ENSMUST00000122376 690 ntBASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Gm44771-201ENSMUST00000206975 626 ntBASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf2Q8BZT2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms