Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Gm44771-201ENSMUST00000206975 626 ntBASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Rps4l-201ENSMUST00000071745 943 ntBASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Scfd1Q8BRF7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scfd1Q8BRF7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scfd1Q8BRF7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Scfd1Q8BRF7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scfd1Q8BRF7 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.79■□□□□ 0.6
Scfd1Q8BRF7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Scfd1Q8BRF7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scfd1Q8BRF7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Scfd1Q8BRF7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scfd1Q8BRF7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scfd1Q8BRF7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.79■□□□□ 0.6
Scfd1Q8BRF7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scfd1Q8BRF7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Gm25745-201ENSMUST00000174945 133 ntBASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scfd1Q8BRF7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scfd1Q8BRF7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scfd1Q8BRF7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scfd1Q8BRF7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms