Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Gm13216-201ENSMUST00000117145 591 ntBASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Gm11355-201ENSMUST00000121120 306 ntBASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab11fip4Q8BQP8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rab11fip4Q8BQP8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rab11fip4Q8BQP8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rab11fip4Q8BQP8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rab11fip4Q8BQP8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rab11fip4Q8BQP8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.27■□□□□ 0.51
Rab11fip4Q8BQP8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rab11fip4Q8BQP8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Rab11fip4Q8BQP8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Gm9103-201ENSMUST00000119371 405 ntBASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab11fip4Q8BQP8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Ank2-226ENSMUST00000189368 339 ntBASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.25■□□□□ 0.51
Rab11fip4Q8BQP8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip4Q8BQP8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Gm27741-201ENSMUST00000185060 237 ntBASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Gm27704-201ENSMUST00000185094 107 ntBASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms