Protein–RNA interactions for Protein: Q8BMN3

Chrnb3, Neuronal acetylcholine receptor subunit beta-3, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb3Q8BMN3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrnb3Q8BMN3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Gm18669-201ENSMUST00000216049 778 ntBASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Chrnb3Q8BMN3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Gm15794-201ENSMUST00000120182 631 ntBASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Mir3081-201ENSMUST00000175305 84 ntBASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.1■□□□□ 0.17
Chrnb3Q8BMN3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Gm10052-201ENSMUST00000168019 960 ntBASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Gm7729-201ENSMUST00000050143 801 ntBASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Chrnb3Q8BMN3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chrnb3Q8BMN3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chrnb3Q8BMN3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chrnb3Q8BMN3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chrnb3Q8BMN3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrnb3Q8BMN3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrnb3Q8BMN3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Chrnb3Q8BMN3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.08■□□□□ 0.16
Chrnb3Q8BMN3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.08■□□□□ 0.16
Chrnb3Q8BMN3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.08■□□□□ 0.16
Chrnb3Q8BMN3 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.08■□□□□ 0.16
Chrnb3Q8BMN3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrnb3Q8BMN3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms