Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh20Q8BIZ0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Gm7889-201ENSMUST00000185591 958 ntBASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Gm37025-201ENSMUST00000195159 829 ntBASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh20Q8BIZ0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh20Q8BIZ0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Gm7638-201ENSMUST00000121348 967 ntBASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms