Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1l4Q8BGJ9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1l4Q8BGJ9 Haglr-201ENSMUST00000100000 2085 ntBASIC19.42■□□□□ 0.7
U2af1l4Q8BGJ9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1l4Q8BGJ9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1l4Q8BGJ9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.42■□□□□ 0.7
U2af1l4Q8BGJ9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.42■□□□□ 0.7
U2af1l4Q8BGJ9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.42■□□□□ 0.7
U2af1l4Q8BGJ9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1l4Q8BGJ9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1l4Q8BGJ9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.42■□□□□ 0.7
U2af1l4Q8BGJ9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
U2af1l4Q8BGJ9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
U2af1l4Q8BGJ9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1l4Q8BGJ9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1l4Q8BGJ9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
U2af1l4Q8BGJ9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
U2af1l4Q8BGJ9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
U2af1l4Q8BGJ9 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.39■□□□□ 0.7
U2af1l4Q8BGJ9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Birc2-201ENSMUST00000054878 378 ntBASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2af1l4Q8BGJ9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Gm6623-201ENSMUST00000173570 544 ntBASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2af1l4Q8BGJ9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
U2af1l4Q8BGJ9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
U2af1l4Q8BGJ9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
U2af1l4Q8BGJ9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
U2af1l4Q8BGJ9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.37■□□□□ 0.69
U2af1l4Q8BGJ9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
U2af1l4Q8BGJ9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
U2af1l4Q8BGJ9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms