Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trnp1Q80ZI1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trnp1Q80ZI1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trnp1Q80ZI1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trnp1Q80ZI1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trnp1Q80ZI1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Trnp1Q80ZI1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trnp1Q80ZI1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.56■□□□□ 0.56
Trnp1Q80ZI1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Gm14057-201ENSMUST00000120631 482 ntBASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Gm36967-201ENSMUST00000193814 266 ntBASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.55■□□□□ 0.56
Trnp1Q80ZI1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 Gm8969-201ENSMUST00000199694 526 ntBASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trnp1Q80ZI1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Gm11025-201ENSMUST00000140773 466 ntBASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Gm5682-201ENSMUST00000173402 505 ntBASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trnp1Q80ZI1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trnp1Q80ZI1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trnp1Q80ZI1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trnp1Q80ZI1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trnp1Q80ZI1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trnp1Q80ZI1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.52■□□□□ 0.56
Trnp1Q80ZI1 Gm27646-201ENSMUST00000183989 110 ntBASIC18.52■□□□□ 0.56
Trnp1Q80ZI1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.52■□□□□ 0.56
Trnp1Q80ZI1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trnp1Q80ZI1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trnp1Q80ZI1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trnp1Q80ZI1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Trnp1Q80ZI1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trnp1Q80ZI1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Trnp1Q80ZI1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trnp1Q80ZI1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trnp1Q80ZI1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trnp1Q80ZI1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trnp1Q80ZI1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trnp1Q80ZI1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.51■□□□□ 0.55
Trnp1Q80ZI1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trnp1Q80ZI1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trnp1Q80ZI1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms