Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Gm16061-201ENSMUST00000122167 857 ntBASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc116Q80X53 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Gm43799-201ENSMUST00000201845 579 ntBASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Gm7213-201ENSMUST00000215977 950 ntBASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Gm18115-201ENSMUST00000221209 621 ntBASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc116Q80X53 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ccdc116Q80X53 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Ccdc116Q80X53 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Gm7889-201ENSMUST00000185591 958 ntBASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc116Q80X53 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ccdc116Q80X53 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms