Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19■□□□□ 0.63
Prpf40bQ80W14 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19■□□□□ 0.63
Prpf40bQ80W14 Rps4l-201ENSMUST00000071745 943 ntBASIC19■□□□□ 0.63
Prpf40bQ80W14 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19■□□□□ 0.63
Prpf40bQ80W14 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 Gm15743-202ENSMUST00000182690 1901 ntBASIC19■□□□□ 0.63
Prpf40bQ80W14 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf40bQ80W14 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.99■□□□□ 0.63
Prpf40bQ80W14 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf40bQ80W14 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf40bQ80W14 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf40bQ80W14 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.99■□□□□ 0.63
Prpf40bQ80W14 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Prpf40bQ80W14 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf40bQ80W14 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf40bQ80W14 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf40bQ80W14 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.99■□□□□ 0.63
Prpf40bQ80W14 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf40bQ80W14 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Prpf40bQ80W14 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf40bQ80W14 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf40bQ80W14 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf40bQ80W14 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.98■□□□□ 0.63
Prpf40bQ80W14 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Prpf40bQ80W14 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf40bQ80W14 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf40bQ80W14 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.97■□□□□ 0.63
Prpf40bQ80W14 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40bQ80W14 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.96■□□□□ 0.63
Prpf40bQ80W14 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Gm12644-201ENSMUST00000119935 606 ntBASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Gm15372-201ENSMUST00000120729 834 ntBASIC18.95■□□□□ 0.62
Prpf40bQ80W14 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40bQ80W14 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms