Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3tc2Q80VA5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3tc2Q80VA5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Gm6376-201ENSMUST00000209407 580 ntBASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3tc2Q80VA5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Mir5131-201ENSMUST00000175426 93 ntBASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Gm6296-201ENSMUST00000222599 943 ntBASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3tc2Q80VA5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms